[INFO] cloning repository https://github.com/biodatageeks/polars-bio
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/biodatageeks/polars-bio" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbiodatageeks%2Fpolars-bio", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbiodatageeks%2Fpolars-bio'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b9566ddf2a18e3e649b105676e09f6d564a0b502
[INFO] checking biodatageeks/polars-bio against master#40557f6225e337d68c8d4f086557ce54135f5dd9 for pr-158447
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbiodatageeks%2Fpolars-bio" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-5-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-5-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/biodatageeks/polars-bio
[INFO] finished tweaking git repo https://github.com/biodatageeks/polars-bio
[INFO] tweaked toml for git repo https://github.com/biodatageeks/polars-bio written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/biodatageeks/polars-bio on toolchain 40557f6225e337d68c8d4f086557ce54135f5dd9
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+40557f6225e337d68c8d4f086557ce54135f5dd9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/biodatageeks/polars-bio already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+40557f6225e337d68c8d4f086557ce54135f5dd9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating git repository `https://github.com/biodatageeks/datafusion-bio-formats.git`
[INFO] [stderr]     Updating git repository `https://github.com/biodatageeks/datafusion-bio-functions.git`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/biodatageeks/noodles.git`
[INFO] [stderr]     Updating git repository `https://github.com/apache/opendal.git`
[INFO] [stderr]     Updating git repository `https://github.com/biodatageeks/noodles.git`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded datafusion-macros v53.0.0
[INFO] [stderr]   Downloaded datafusion-common-runtime v53.0.0
[INFO] [stderr]   Downloaded abi_stable_shared v0.11.0
[INFO] [stderr]   Downloaded arrow-pyarrow v58.3.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded datafusion-physical-expr-adapter v53.0.0
[INFO] [stderr]   Downloaded datafusion-functions-table v53.0.0
[INFO] [stderr]   Downloaded tstr v0.2.4
[INFO] [stderr]   Downloaded datafusion-functions-window-common v53.0.0
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded tstr_proc_macros v0.2.2
[INFO] [stderr]   Downloaded as_derive_utils v0.11.0
[INFO] [stderr]   Downloaded datafusion-python-util v53.0.0
[INFO] [stderr]   Downloaded datafusion-session v53.0.0
[INFO] [stderr]   Downloaded pyo3-log v0.13.4
[INFO] [stderr]   Downloaded generational-arena v0.2.9
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded datafusion-doc v53.0.0
[INFO] [stderr]   Downloaded core_extensions_proc_macros v1.5.4
[INFO] [stderr]   Downloaded datafusion-datasource-csv v53.0.0
[INFO] [stderr]   Downloaded repr_offset v0.2.2
[INFO] [stderr]   Downloaded datafusion-functions-window v53.0.0
[INFO] [stderr]   Downloaded rayon_iter_concurrent_limit v0.2.0
[INFO] [stderr]   Downloaded noodles-csi v0.49.0
[INFO] [stderr]   Downloaded zarrs_plugin v0.4.1
[INFO] [stderr]   Downloaded pyo3-async-runtimes v0.28.0
[INFO] [stderr]   Downloaded rust-lapper v1.3.0
[INFO] [stderr]   Downloaded reqsign-file-read-tokio v3.0.1
[INFO] [stderr]   Downloaded datafusion-functions-aggregate-common v53.0.0
[INFO] [stderr]   Downloaded datafusion-proto-common v53.0.0
[INFO] [stderr]   Downloaded datafusion-datasource-json v53.0.0
[INFO] [stderr]   Downloaded datafusion-datasource-arrow v53.0.0
[INFO] [stderr]   Downloaded datafusion-datasource-avro v53.0.0
[INFO] [stderr]   Downloaded noodles-bed v0.26.0
[INFO] [stderr]   Downloaded monostate v1.0.2
[INFO] [stderr]   Downloaded zarrs_filesystem v0.3.9
[INFO] [stderr]   Downloaded zarrs_chunk_key_encoding v0.2.0
[INFO] [stderr]   Downloaded zarrs_data_type v0.9.0
[INFO] [stderr]   Downloaded noodles-core v0.17.0
[INFO] [stderr]   Downloaded zarrs_storage v0.4.3
[INFO] [stderr]   Downloaded monostate-impl v1.0.2
[INFO] [stderr]   Downloaded datafusion-catalog v53.0.0
[INFO] [stderr]   Downloaded coitrees v0.4.0
[INFO] [stderr]   Downloaded datafusion-pruning v53.0.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.41.0
[INFO] [stderr]   Downloaded zarrs_chunk_grid v0.5.1
[INFO] [stderr]   Downloaded bon v3.9.3
[INFO] [stderr]   Downloaded datafusion-execution v53.0.0
[INFO] [stderr]   Downloaded zarrs_metadata_ext v0.4.4
[INFO] [stderr]   Downloaded bon-macros v3.9.3
[INFO] [stderr]   Downloaded reqsign-core v3.0.1
[INFO] [stderr]   Downloaded abi_stable_derive v0.11.3
[INFO] [stderr]   Downloaded core_extensions v1.5.4
[INFO] [stderr]   Downloaded noodles-bgzf v0.36.0
[INFO] [stderr]   Downloaded datafusion-expr-common v53.0.0
[INFO] [stderr]   Downloaded blosc-src v0.3.8
[INFO] [stderr]   Downloaded reqsign-google v3.0.1
[INFO] [stderr]   Downloaded datafusion-functions-nested v53.0.0
[INFO] [stderr]   Downloaded datafusion-physical-optimizer v53.0.0
[INFO] [stderr]   Downloaded blusc v0.0.6
[INFO] [stderr]   Downloaded datafusion-python v53.0.0
[INFO] [stderr]   Downloaded datafusion-ffi v53.0.0
[INFO] [stderr]   Downloaded datafusion-physical-expr-common v53.0.0
[INFO] [stderr]   Downloaded datafusion-datasource-parquet v53.0.0
[INFO] [stderr]   Downloaded snappy_src v0.2.5+snappy.1.2.2
[INFO] [stderr]   Downloaded mea v0.6.4
[INFO] [stderr]   Downloaded datafusion-datasource v53.0.0
[INFO] [stderr]   Downloaded datafusion-functions-aggregate v53.0.0
[INFO] [stderr]   Downloaded apache-avro v0.21.0
[INFO] [stderr]   Downloaded byteordered v0.6.0
[INFO] [stderr]   Downloaded datafusion-proto v53.0.0
[INFO] [stderr]   Downloaded datafusion-optimizer v53.0.0
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded reqsign-aws-v4 v3.0.1
[INFO] [stderr]   Downloaded noodles-tabix v0.55.0
[INFO] [stderr]   Downloaded datafusion-common v53.0.0
[INFO] [stderr]   Downloaded datafusion v53.0.0
[INFO] [stderr]   Downloaded noodles-fastq v0.19.0
[INFO] [stderr]   Downloaded datafusion-expr v53.0.0
[INFO] [stderr]   Downloaded datafusion-sql v53.0.0
[INFO] [stderr]   Downloaded reqsign-azure-storage v3.0.1
[INFO] [stderr]   Downloaded datafusion-functions v53.0.0
[INFO] [stderr]   Downloaded quick-xml v0.40.1
[INFO] [stderr]   Downloaded abi_stable v0.11.3
[INFO] [stderr]   Downloaded zarrs v0.23.13
[INFO] [stderr]   Downloaded datafusion-physical-plan v53.0.0
[INFO] [stderr]   Downloaded zarrs_codec v0.2.1
[INFO] [stderr]   Downloaded quick_cache v0.6.24
[INFO] [stderr]   Downloaded unsafe_cell_slice v0.2.2
[INFO] [stderr]   Downloaded zarrs_metadata v0.7.5
[INFO] [stderr]   Downloaded parquet v58.3.0
[INFO] [stderr]   Downloaded positioned-io v0.3.5
[INFO] [stderr]   Downloaded bigtools v0.5.8
[INFO] [stderr]   Downloaded datafusion-catalog-listing v53.0.0
[INFO] [stderr]   Downloaded datafusion-physical-expr v53.0.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3a6becf2bc8dde7f3fa57ede90e4f284e72d296796fc446bbb1e2c7cc0530151" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stderr] Error response from daemon: write /var/lib/containerd/io.containerd.metadata.v1.bolt/meta.db: no space left on device


sandbox container could not be created: command failed: exit status: 1

Error response from daemon: write /var/lib/containerd/io.containerd.metadata.v1.bolt/meta.db: no space left on device

Caused by:
    command failed: exit status: 1
    
    Error response from daemon: write /var/lib/containerd/io.containerd.metadata.v1.bolt/meta.db: no space left on device